Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yrbn | DQE83_16690 | Not Available | Positive | 3379541 - 3379621 | 2979.59 |
| dead/deah family atp-dependent rna helicase | DQE83_16695 | Not Available | Positive | 3379614 - 3381503 | 70478.5 |
| tryptophan permease | DQE83_16700 | Not Available | Positive | 3381657 - 3382901 | 44367.2 |
| u32 family peptidase | DQE83_16710 | Not Available | Negative | 3384109 - 3384987 | 32475.0 |
| collagenase | DQE83_16715 | Not Available | Negative | 3384996 - 3385991 | 37035.2 |
| scp2 domain-containing protein | DQE83_16720 | Not Available | Positive | 3386200 - 3386724 | 19673.0 |
| n-acetyltransferase | DQE83_16725 | Not Available | Positive | 3386718 - 3387221 | 18534.8 |
| giy-yig nuclease family protein | DQE83_16730 | Not Available | Negative | 3387208 - 3387510 | 11241.6 |
| hypothetical protein | DQE83_16735 | Not Available | Positive | 3387561 - 3388004 | 16707.2 |
| glutamine amidotransferase | DQE83_16740 | Not Available | Negative | 3387984 - 3388502 | 18859.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





