Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | DQE83_16640 | Not Available | Negative | 3367499 - 3368842 | 49901.3 |
| Trna-met | Not Available | Not Available | Positive | 3369190 - 3369266 | Not Available |
| ribosome maturation factor | DQE83_16650 | Not Available | Positive | 3369473 - 3369925 | 16651.9 |
| transcription termination protein nusa | DQE83_16655 | Not Available | Positive | 3369953 - 3371440 | 54888.0 |
| translation initiation factor if-2 | DQE83_16660 | Not Available | Positive | 3371465 - 3374137 | 97385.6 |
| 30s ribosome-binding factor rbfa | DQE83_16665 | Not Available | Positive | 3374296 - 3374697 | 15155.4 |
| trna pseudouridine(55) synthase trub | DQE83_16670 | Not Available | Positive | 3374697 - 3375641 | 35137.3 |
| 30s ribosomal protein s15 | DQE83_16675 | Not Available | Positive | 3375790 - 3376059 | 10269.4 |
| polyribonucleotide nucleotidyltransferase | DQE83_16680 | Not Available | Positive | 3376306 - 3378441 | 77119.6 |
| lipoprotein nlpi | DQE83_16685 | Not Available | Positive | 3378550 - 3379434 | 33622.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





