Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_16325 | Not Available | Positive | 3296116 - 3296766 | 25285.5 |
| 2fe-2s ferredoxin-like protein | DQE83_16330 | Not Available | Negative | 3296820 - 3297074 | 9275.25 |
| ribonucleoside-diphosphate reductase 1 subunit beta | DQE83_16335 | Not Available | Negative | 3297074 - 3298204 | 43519.6 |
| ribonucleoside-diphosphate reductase subunit alpha | DQE83_16340 | Not Available | Negative | 3298350 - 3300635 | 85722.9 |
| aida-i family autotransporter yfal | DQE83_16350 | Not Available | Positive | 3301332 - 3305060 | 130224.0 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | DQE83_16355 | Not Available | Negative | 3305200 - 3305922 | 26543.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | DQE83_16360 | Not Available | Positive | 3306069 - 3308696 | 96955.3 |
| duf2138 domain-containing protein | DQE83_16365 | Not Available | Positive | 3308845 - 3310533 | 62752.8 |
| duf1175 domain-containing protein | DQE83_16370 | Not Available | Positive | 3310530 - 3311153 | 23736.5 |
| alpha-2-macroglobulin family protein | DQE83_16375 | Not Available | Positive | 3311087 - 3315691 | 170158.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





