Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | DQE83_16225 | Not Available | Negative | 3272110 - 3274092 | 74166.9 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DQE83_16230 | Not Available | Negative | 3274092 - 3275060 | 36272.2 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | DQE83_16235 | Not Available | Negative | 3275064 - 3276203 | 41616.2 |
| histidine phosphatase family protein | DQE83_16240 | Not Available | Positive | 3276511 - 3277113 | 22364.9 |
| nucleoside triphosphatase nudi | DQE83_16245 | Not Available | Negative | 3277152 - 3277577 | 16401.6 |
| hypothetical protein | DQE83_16250 | Not Available | Positive | 3277856 - 3278398 | 18596.8 |
| competence/damage-inducible protein cina | DQE83_16255 | Not Available | Positive | 3278498 - 3279700 | 44226.2 |
| iclr family transcriptional regulator | DQE83_16260 | Not Available | Positive | 3279920 - 3280702 | 28845.8 |
| l-rhamnonate dehydratase | DQE83_16265 | Not Available | Positive | 3280717 - 3281922 | 44213.0 |
| mfs transporter | DQE83_16270 | Not Available | Positive | 3281979 - 3283268 | 46152.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





