Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase | DQE83_15375 | Not Available | Negative | 3096376 - 3097464 | 40607.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_15380 | Not Available | Negative | 3097606 - 3101589 | 140625.0 |
| choline transporter | DQE83_15385 | Not Available | Negative | 3102162 - 3104195 | 75846.5 |
| hypothetical protein | DQE83_15390 | Not Available | Negative | 3104192 - 3104407 | 8117.77 |
| transcriptional regulator beti | DQE83_15395 | Not Available | Positive | 3104324 - 3104911 | 21871.4 |
| betaine-aldehyde dehydrogenase | DQE83_15400 | Not Available | Positive | 3104925 - 3106397 | 53021.3 |
| choline dehydrogenase | DQE83_15405 | Not Available | Positive | 3106411 - 3108081 | 61837.1 |
| hypothetical protein | DQE83_15410 | Not Available | Positive | 3108295 - 3108795 | 19258.7 |
| universal stress protein | DQE83_15415 | Not Available | Positive | 3108767 - 3108964 | 7451.27 |
| lactate utilization protein c | DQE83_15425 | Not Available | Negative | 3109036 - 3109731 | 25169.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





