Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanase | DQE83_15230 | Not Available | Negative | 3065327 - 3065797 | 17048.8 |
| carbonic anhydrase | DQE83_15235 | Not Available | Negative | 3065828 - 3066487 | 23775.6 |
| transcriptional regulator cynr | DQE83_15240 | Not Available | Positive | 3066597 - 3067496 | 32951.7 |
| cytosine deaminase | DQE83_15245 | Not Available | Negative | 3067629 - 3068912 | 47627.9 |
| cytosine permease | DQE83_15250 | Not Available | Negative | 3068902 - 3070161 | 43652.3 |
| propionate--coa ligase | DQE83_15255 | Not Available | Negative | 3070591 - 3072477 | 69423.8 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | DQE83_15260 | Not Available | Negative | 3072517 - 3073968 | 53981.7 |
| 2-methylcitrate synthase | DQE83_15265 | Not Available | Negative | 3074002 - 3075171 | 43166.6 |
| methylisocitrate lyase | DQE83_15270 | Not Available | Negative | 3075332 - 3076222 | 32123.5 |
| propionate catabolism operon regulatory protein prpr | DQE83_15275 | Not Available | Positive | 3076461 - 3078047 | 58590.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





