Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe3+/spermidine/putrescine abc transporter atp-binding protein | DQE83_00340 | Not Available | Positive | 60275 - 61411 | 43030.8 |
| spermidine/putrescine abc transporter permease potb | DQE83_00345 | Not Available | Positive | 61395 - 62252 | 32210.3 |
| spermidine/putrescine abc transporter permease | DQE83_00350 | Not Available | Positive | 62249 - 63043 | 29112.7 |
| spermidine/putrescine-binding periplasmic protein | DQE83_00355 | Not Available | Positive | 63040 - 64086 | 38855.0 |
| duf3592 domain-containing protein | DQE83_00360 | Not Available | Positive | 64144 - 64605 | 17457.9 |
| tpm domain-containing protein | DQE83_00365 | Not Available | Positive | 64602 - 65387 | 28664.3 |
| nad-dependent deacylase | DQE83_00370 | Not Available | Negative | 65525 - 66346 | 30938.2 |
| n-acetylglucosamine kinase | DQE83_00375 | Not Available | Negative | 66362 - 67273 | 33117.8 |
| lipoprotein-releasing abc transporter permease subunit lole | DQE83_00380 | Not Available | Negative | 67302 - 68546 | 45326.0 |
| lipoprotein-releasing system atp-binding protein lold | DQE83_00385 | Not Available | Negative | 68546 - 69247 | 25453.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





