Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | DQE83_14815 | Not Available | Negative | 2982806 - 2983783 | 35072.8 |
| n utilization substance protein b | DQE83_14820 | Not Available | Negative | 2983861 - 2984280 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | DQE83_14825 | Not Available | Negative | 2984300 - 2984770 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DQE83_14830 | Not Available | Negative | 2984859 - 2985962 | 40405.7 |
| transcriptional regulator nrdr | DQE83_14835 | Not Available | Negative | 2985966 - 2986415 | 17229.9 |
| duf3251 domain-containing protein | DQE83_14840 | Not Available | Positive | 2986566 - 2987105 | 19581.5 |
| nucleoside-specific channel-forming protein tsx | DQE83_14845 | Not Available | Positive | 2987403 - 2988287 | 33590.6 |
| hnh endonuclease | DQE83_14850 | Not Available | Negative | 2988464 - 2988811 | 13364.7 |
| type ii toxin-antitoxin system rele/pare family toxin | DQE83_14855 | Not Available | Negative | 2988899 - 2989180 | 11004.3 |
| type ii toxin-antitoxin system pard family antitoxin | DQE83_14860 | Not Available | Negative | 2989173 - 2989415 | 8997.73 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





