Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | DQE83_14765 | Not Available | Negative | 2972460 - 2972951 | 18344.9 |
| 2-dehydropantoate 2-reductase | DQE83_14770 | Not Available | Positive | 2973119 - 2974030 | 33932.8 |
| protein deglycase yajl | DQE83_14775 | Not Available | Positive | 2973993 - 2974583 | 20823.3 |
| trna 4-thiouridine(8) synthase thii | DQE83_14780 | Not Available | Negative | 2974637 - 2976085 | 54962.3 |
| exodeoxyribonuclease 7 small subunit | DQE83_14785 | Not Available | Positive | 2976291 - 2976533 | 8952.42 |
| farnesyl-diphosphate synthase | DQE83_14790 | Not Available | Positive | 2976533 - 2977432 | 32161.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DQE83_14795 | Not Available | Positive | 2977457 - 2979319 | 67660.0 |
| aldo/keto reductase | DQE83_14800 | Not Available | Positive | 2979374 - 2980348 | 36452.2 |
| hypothetical protein | DQE83_14805 | Not Available | Positive | 2980579 - 2982135 | 59982.1 |
| phosphatidylglycerophosphatase a | DQE83_14810 | Not Available | Negative | 2982313 - 2982828 | 19332.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





