Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase activating protein | DQE83_14495 | Not Available | Positive | 2919712 - 2920176 | 17446.9 |
| cytochrome b562 | DQE83_14500 | Not Available | Negative | 2920221 - 2920607 | 14019.7 |
| metalloprotease pmba | DQE83_14505 | Not Available | Negative | 2920791 - 2922143 | 48372.4 |
| ribosome-associated protein | DQE83_14510 | Not Available | Positive | 2922237 - 2922788 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | DQE83_14515 | Not Available | Negative | 2922940 - 2924313 | 49882.0 |
| fructose 1,6-bisphosphatase | DQE83_14520 | Not Available | Positive | 2924489 - 2925487 | 36836.0 |
| sugar abc transporter permease yjff | DQE83_14525 | Not Available | Negative | 2925520 - 2926515 | 35042.0 |
| abc transporter permease | DQE83_14530 | Not Available | Negative | 2926502 - 2927527 | 35663.3 |
| sugar abc transporter atp-binding protein | DQE83_14535 | Not Available | Negative | 2927538 - 2929040 | 55323.5 |
| hypothetical protein | DQE83_14540 | Not Available | Negative | 2929062 - 2929271 | 8039.94 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





