Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf898 domain-containing protein | DQE83_14395 | Not Available | Negative | 2899188 - 2900384 | 44876.2 |
| n-acetyltransferase | DQE83_14400 | Not Available | Positive | 2900577 - 2901080 | 18623.5 |
| regulator of ribonuclease activity b | DQE83_14405 | Not Available | Negative | 2901225 - 2901641 | 15589.5 |
| ornithine carbamoyltransferase | DQE83_14410 | Not Available | Positive | 2901803 - 2902807 | 36879.2 |
| hypothetical protein | DQE83_14415 | Not Available | Negative | 2902864 - 2904639 | 68511.6 |
| yhch/yjgk/yial family protein | DQE83_14420 | Not Available | Negative | 2904762 - 2905214 | 16894.4 |
| tetr family transcriptional regulator | DQE83_14425 | Not Available | Negative | 2905359 - 2905952 | 21488.7 |
| oxidoreductase | DQE83_14430 | Not Available | Positive | 2906023 - 2906736 | 24620.6 |
| rida family protein | DQE83_14435 | Not Available | Positive | 2906867 - 2907262 | 14577.1 |
| hypothetical protein | DQE83_14440 | Not Available | Negative | 2907231 - 2907413 | 6851.42 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





