Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-idonate 5-dehydrogenase | DQE83_14345 | Not Available | Positive | 2885611 - 2886642 | 37095.6 |
| gluconate 5-dehydrogenase | DQE83_14350 | Not Available | Positive | 2886666 - 2887430 | 27563.3 |
| gluconate permease | DQE83_14355 | Not Available | Positive | 2887495 - 2888814 | 46035.2 |
| transcriptional regulator | DQE83_14360 | Not Available | Positive | 2888881 - 2889879 | 37569.5 |
| hypothetical protein | DQE83_14365 | Not Available | Positive | 2889957 - 2891447 | 53965.9 |
| lps export abc transporter permease lptg | DQE83_14370 | Not Available | Negative | 2891608 - 2892690 | 39621.0 |
| lps export abc transporter permease lptf | DQE83_14375 | Not Available | Negative | 2892690 - 2893790 | 40360.1 |
| cytosol aminopeptidase | DQE83_14380 | Not Available | Positive | 2894057 - 2895568 | 54883.1 |
| dna polymerase iii subunit chi | DQE83_14385 | Not Available | Positive | 2895836 - 2896279 | 16574.5 |
| valine--trna ligase | DQE83_14390 | Not Available | Positive | 2896279 - 2899134 | 108184.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





