Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-adapter protein irad | DQE83_14110 | Not Available | Negative | 2825016 - 2825408 | 14802.8 |
| hypothetical protein | DQE83_14120 | Not Available | Positive | 2826081 - 2826911 | 30715.8 |
| uxu operon transcriptional regulator | DQE83_14125 | Not Available | Negative | 2827051 - 2827824 | 29252.8 |
| hypothetical protein | DQE83_14130 | Not Available | Positive | 2827823 - 2828017 | 7068.71 |
| fructuronate reductase | DQE83_14135 | Not Available | Negative | 2828039 - 2829499 | 53687.4 |
| mannonate dehydratase | DQE83_14140 | Not Available | Negative | 2829580 - 2830764 | 44796.5 |
| hypothetical protein | DQE83_14145 | Not Available | Negative | 2830716 - 2831024 | 11845.5 |
| gluconate transporter | DQE83_14150 | Not Available | Positive | 2831104 - 2832447 | 47141.0 |
| fimbrial protein | DQE83_14155 | Not Available | Negative | 2832621 - 2833523 | 31502.2 |
| type 1 fimbrial protein | DQE83_14160 | Not Available | Negative | 2833543 - 2834046 | 17397.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





