Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component-system connector protein arir | DQE83_00250 | Not Available | Negative | 44338 - 44604 | 9721.62 |
| Ncrna_class:other | Not Available | Not Available | Positive | 44753 - 44884 | Not Available |
| two-component-system connector protein ymga | DQE83_00255 | Not Available | Negative | 44633 - 44905 | 10310.5 |
| two-component-system connector protein ycgz | DQE83_00260 | Not Available | Negative | 44948 - 45184 | 8694.37 |
| eal domain-containing protein | DQE83_00265 | Not Available | Positive | 45498 - 46709 | 45503.8 |
| helix-turn-helix-type transcriptional regulator | DQE83_00270 | Not Available | Positive | 46914 - 47645 | 28209.1 |
| duf1398 domain-containing protein | DQE83_00275 | Not Available | Positive | 47865 - 48269 | 15769.0 |
| anti-adapter protein iram | DQE83_00280 | Not Available | Positive | 48969 - 49292 | 12192.1 |
| nadp-dependent isocitrate dehydrogenase | DQE83_00285 | Not Available | Negative | 49395 - 50645 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | DQE83_00290 | Not Available | Positive | 50817 - 51470 | 24939.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





