Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | Positive | 2760223 - 2760296 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2760298 - 2760374 | Not Available |
| hypothetical protein | DQE83_13785 | Not Available | Positive | 2760724 - 2761041 | 11708.7 |
| antitermination protein | DQE83_13790 | Not Available | Negative | 2761257 - 2762009 | 27923.6 |
| hypothetical protein | DQE83_13795 | Not Available | Negative | 2762023 - 2763012 | 37123.9 |
| kila-n domain-containing protein | DQE83_13800 | Not Available | Negative | 2763020 - 2763829 | 30137.3 |
| rusa family crossover junction endodeoxyribonuclease | DQE83_13805 | Not Available | Negative | 2763849 - 2764238 | 14174.1 |
| phage n-6-adenine-methyltransferase | DQE83_13815 | Not Available | Negative | 2764557 - 2765210 | 24473.0 |
| perc family transcriptional regulator | DQE83_13820 | Not Available | Negative | 2765210 - 2765704 | 18830.2 |
| replication protein | DQE83_13825 | Not Available | Negative | 2765701 - 2766069 | 13791.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





