Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase tsae | DQE83_13565 | Not Available | Positive | 2725200 - 2725661 | 16854.0 |
| n-acetylmuramoyl-l-alanine amidase amib | DQE83_13570 | Not Available | Positive | 2725680 - 2727017 | 47931.9 |
| dna mismatch repair endonuclease mutl | DQE83_13575 | Not Available | Positive | 2727027 - 2728874 | 67966.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DQE83_13580 | Not Available | Positive | 2728867 - 2729817 | 35067.1 |
| rna-binding protein hfq | DQE83_13585 | Not Available | Positive | 2729903 - 2730211 | 11167.0 |
| gtpase hflx | DQE83_13590 | Not Available | Positive | 2730287 - 2731567 | 48329.0 |
| protease modulator hflk | DQE83_13595 | Not Available | Positive | 2731653 - 2732912 | 45547.5 |
| protease modulator hflc | DQE83_13600 | Not Available | Positive | 2732915 - 2733919 | 37652.0 |
| duf2065 domain-containing protein | DQE83_13605 | Not Available | Positive | 2734001 - 2734198 | 7166.26 |
| adenylosuccinate synthetase | DQE83_13610 | Not Available | Positive | 2734302 - 2735600 | 47347.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





