Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | DQE83_13360 | Not Available | Negative | 2683684 - 2685201 | 57828.9 |
| mfs transporter | DQE83_13365 | Not Available | Negative | 2685438 - 2686895 | 52868.6 |
| lysine decarboxylase cada | DQE83_13370 | Not Available | Negative | 2686954 - 2689101 | 81263.7 |
| cadaverine/lysine antiporter | DQE83_13375 | Not Available | Negative | 2689181 - 2690515 | 46649.7 |
| transcriptional regulator cadc | DQE83_13380 | Not Available | Negative | 2690881 - 2692419 | 57935.2 |
| hypothetical protein | DQE83_13385 | Not Available | Positive | 2692706 - 2692924 | 8081.85 |
| Trna-phe | Not Available | Not Available | Positive | 2693036 - 2693111 | Not Available |
| transcriptional regulator | DQE83_13395 | Not Available | Negative | 2693218 - 2693793 | 21932.3 |
| protein-disulfide reductase dsbd | DQE83_13400 | Not Available | Negative | 2693830 - 2695527 | 61804.6 |
| divalent-cation tolerance protein cuta | DQE83_13405 | Not Available | Negative | 2695503 - 2695841 | 12331.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





