Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance transporter | DQE83_13095 | Not Available | Negative | 2632281 - 2633747 | 53425.3 |
| multidrug transporter subunit mdtn | DQE83_13105 | Not Available | Negative | 2635820 - 2636851 | 36910.3 |
| hypothetical protein | DQE83_13110 | Not Available | Negative | 2636870 - 2637145 | 10301.2 |
| alkyl/aryl-sulfatase | DQE83_13115 | Not Available | Negative | 2637354 - 2639339 | 73266.1 |
| allose kinase | DQE83_13120 | Not Available | Negative | 2639612 - 2640541 | 33668.6 |
| d-allulose-6-phosphate 3-epimerase | DQE83_13125 | Not Available | Negative | 2640525 - 2641220 | 26140.7 |
| d-allose abc transporter permease | DQE83_13130 | Not Available | Negative | 2641231 - 2642211 | 34317.8 |
| d-allose abc transporter atp-binding protein alsa | DQE83_13135 | Not Available | Negative | 2642190 - 2643722 | 56824.4 |
| d-allose transporter substrate-binding protein | DQE83_13140 | Not Available | Negative | 2643849 - 2644784 | 32911.7 |
| murr/rpir family transcriptional regulator | DQE83_13145 | Not Available | Negative | 2644843 - 2645733 | 32364.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





