Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | DQE83_12945 | Not Available | Positive | 2602677 - 2603033 | 13520.2 |
| excinuclease abc subunit a | DQE83_12950 | Not Available | Negative | 2603068 - 2605890 | 103874.0 |
| ssdna-binding protein | DQE83_12955 | Not Available | Positive | 2606145 - 2606681 | 18976.1 |
| hypothetical protein | DQE83_12960 | Not Available | Negative | 2606883 - 2607359 | 18146.6 |
| hypothetical protein | DQE83_12965 | Not Available | Negative | 2607631 - 2607912 | 10304.0 |
| integrase | DQE83_12970 | Not Available | Positive | 2607871 - 2608047 | 6184.47 |
| eal domain-containing protein | DQE83_12975 | Not Available | Positive | 2608342 - 2609928 | 60611.4 |
| regulatory protein soxs | DQE83_12980 | Not Available | Negative | 2609931 - 2610254 | 12911.6 |
| redox-sensitive transcriptional activator soxr | DQE83_12985 | Not Available | Positive | 2610340 - 2610804 | 17235.8 |
| hypothetical protein | DQE83_12990 | Not Available | Positive | 2610791 - 2611057 | 10031.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





