Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3811 domain-containing protein | DQE83_12740 | Not Available | Negative | 2563624 - 2563896 | 10546.7 |
| lysine-sensitive aspartokinase 3 | DQE83_12745 | Not Available | Negative | 2564149 - 2565498 | 48580.6 |
| hypothetical protein | DQE83_12755 | Not Available | Positive | 2565820 - 2566023 | 7632.09 |
| glucose-6-phosphate isomerase | DQE83_12760 | Not Available | Positive | 2566023 - 2567672 | 61533.1 |
| hypothetical protein | DQE83_12765 | Not Available | Positive | 2568184 - 2568426 | 7386.46 |
| hypothetical protein | DQE83_12770 | Not Available | Positive | 2568613 - 2569251 | 23862.3 |
| hypothetical protein | DQE83_12775 | Not Available | Positive | 2569248 - 2569985 | 26314.4 |
| yjbh domain-containing protein | DQE83_12780 | Not Available | Positive | 2569985 - 2572081 | 78571.2 |
| hypothetical protein | DQE83_12785 | Not Available | Negative | 2572128 - 2572406 | 10065.3 |
| phosphate-starvation-inducible protein psie | DQE83_12790 | Not Available | Positive | 2572678 - 2573088 | 15597.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





