Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_00100 | Not Available | Positive | 19417 - 20853 | 55129.0 |
| alanine racemase catabolic | DQE83_00105 | Not Available | Negative | 21022 - 22092 | 38842.9 |
| d-amino acid dehydrogenase small subunit | DQE83_00110 | Not Available | Negative | 22102 - 23400 | 47610.1 |
| spovr family protein | DQE83_00115 | Not Available | Positive | 23730 - 25262 | 60803.1 |
| fatty acid metabolism transcriptional regulator fadr | DQE83_00120 | Not Available | Negative | 25314 - 26033 | 26970.2 |
| na+/h+ antiporter nhab | DQE83_00125 | Not Available | Positive | 26255 - 27796 | 56731.8 |
| disulfide bond formation protein b | DQE83_00130 | Not Available | Positive | 27942 - 28472 | 20143.3 |
| dna polymerase v subunit umuc | DQE83_00135 | Not Available | Negative | 28512 - 29786 | 47920.6 |
| protein umud | DQE83_00140 | Not Available | Negative | 29786 - 30205 | 15064.2 |
| hemolysin hlye | DQE83_00145 | Not Available | Positive | 30578 - 31489 | 33691.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





