Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_12150 | Not Available | Positive | 2434654 - 2435259 | 22595.0 |
| duf1508 domain-containing protein | DQE83_12160 | Not Available | Negative | 2436813 - 2437145 | 11994.9 |
| dna-binding response regulator | DQE83_12165 | Not Available | Negative | 2437336 - 2438058 | 27657.5 |
| two-component system sensor histidine kinase baes | DQE83_12170 | Not Available | Negative | 2438055 - 2439458 | 51975.4 |
| multidrug transporter subunit mdtd | DQE83_12175 | Not Available | Negative | 2439455 - 2440870 | 50946.3 |
| multidrug transporter subunit mdtc | DQE83_12180 | Not Available | Negative | 2440871 - 2443948 | 110961.0 |
| multidrug transporter subunit mdtb | DQE83_12185 | Not Available | Negative | 2443949 - 2447071 | 112114.0 |
| multidrug transporter subunit mdta | DQE83_12190 | Not Available | Negative | 2447071 - 2448318 | 44403.7 |
| small toxic protein ibsb | DQE83_12195 | Not Available | Positive | 2448597 - 2448653 | 2063.86 |
| type i toxin-antitoxin system ibs family toxin | DQE83_12200 | Not Available | Positive | 2448926 - 2448985 | 2232.03 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





