Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DQE83_11880 | Not Available | Positive | 2375213 - 2375974 | 26922.4 |
| deda family protein | DQE83_11885 | Not Available | Negative | 2376104 - 2376682 | 21422.9 |
| yip1 family protein | DQE83_11890 | Not Available | Positive | 2376852 - 2377439 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | DQE83_11895 | Not Available | Positive | 2377613 - 2378545 | 33871.3 |
| d-lactate dehydrogenase | DQE83_11900 | Not Available | Negative | 2378584 - 2380299 | 64680.0 |
| beta-glucosidase bglx | DQE83_11905 | Not Available | Positive | 2380495 - 2382792 | 83534.8 |
| abc transporter substrate-binding protein | DQE83_11910 | Not Available | Positive | 2383045 - 2383962 | 32655.0 |
| abc transporter permease | DQE83_11915 | Not Available | Positive | 2383969 - 2385126 | 41172.3 |
| abc transporter atp-binding protein | DQE83_11920 | Not Available | Positive | 2385119 - 2386045 | 34391.6 |
| abc transporter permease | DQE83_11925 | Not Available | Positive | 2386050 - 2386781 | 25616.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





