Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_11720 | Not Available | Positive | 2347862 - 2348044 | 7171.77 |
| amino acid permease | DQE83_11725 | Not Available | Positive | 2348028 - 2349497 | 53536.9 |
| hypothetical protein | DQE83_11730 | Not Available | Positive | 2349594 - 2349797 | 7747.26 |
| catecholate siderophore receptor cira | DQE83_11735 | Not Available | Positive | 2349790 - 2351769 | 73386.9 |
| s-formylglutathione hydrolase | DQE83_11740 | Not Available | Negative | 2351801 - 2352637 | 31346.9 |
| hypothetical protein | DQE83_11745 | Not Available | Negative | 2352565 - 2352741 | 6430.51 |
| phenylalanyl-trna synthetase subunit beta | DQE83_11750 | Not Available | Positive | 2352798 - 2352911 | 3947.66 |
| gtp cyclohydrolase i fole | DQE83_11755 | Not Available | Positive | 2352895 - 2353563 | 24832.1 |
| duf418 family protein | DQE83_11760 | Not Available | Positive | 2353580 - 2354737 | 43328.1 |
| hypothetical protein | DQE83_11765 | Not Available | Negative | 2354686 - 2354889 | 7306.68 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





