Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iibc | DQE83_11660 | Not Available | Positive | 2335201 - 2336892 | 57546.6 |
| pseudouridine kinase | DQE83_11665 | Not Available | Positive | 2337316 - 2338257 | 33645.9 |
| pseudouridine-5'-phosphate glycosidase | DQE83_11670 | Not Available | Positive | 2338245 - 2339183 | 32883.8 |
| nupc/nupg family nucleoside cnt transporter | DQE83_11675 | Not Available | Positive | 2339277 - 2340527 | 43404.3 |
| ribosylpyrimidine nucleosidase | DQE83_11690 | Not Available | Positive | 2341425 - 2342366 | 33734.1 |
| nucleoside permease nupx | DQE83_11695 | Not Available | Positive | 2342466 - 2343716 | 43412.3 |
| sugar kinase | DQE83_11700 | Not Available | Negative | 2343772 - 2344860 | 39621.5 |
| endonuclease | DQE83_11705 | Not Available | Negative | 2344863 - 2345720 | 31463.2 |
| yeih family putative sulfate export transporter | DQE83_11710 | Not Available | Negative | 2345794 - 2346843 | 36884.3 |
| lysr family transcriptional regulator | DQE83_11715 | Not Available | Positive | 2346942 - 2347823 | 32725.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





