Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-gmp phosphodiesterase | DQE83_11610 | Not Available | Negative | 2324329 - 2325885 | 58531.4 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | DQE83_11615 | Not Available | Negative | 2326066 - 2326632 | 21041.1 |
| hypothetical protein | DQE83_11620 | Not Available | Negative | 2327044 - 2327757 | 26759.7 |
| hypothetical protein | DQE83_11625 | Not Available | Negative | 2327796 - 2328782 | 36060.3 |
| fructuronate reductase | DQE83_11630 | Not Available | Negative | 2328900 - 2330366 | 53910.6 |
| elongation factor p-like protein yeip | DQE83_11635 | Not Available | Negative | 2330589 - 2331161 | 21533.9 |
| ykgj family cysteine cluster protein | DQE83_11640 | Not Available | Positive | 2331316 - 2331570 | 8954.96 |
| sugar efflux transporter setb | DQE83_11645 | Not Available | Negative | 2331567 - 2332748 | 42687.5 |
| hpr family phosphocarrier protein | DQE83_11650 | Not Available | Positive | 2333116 - 2334246 | 39668.2 |
| 1-phosphofructokinase | DQE83_11655 | Not Available | Positive | 2334246 - 2335184 | 33757.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





