Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein | DQE83_11550 | Not Available | Positive | 2312663 - 2313670 | 37825.6 |
| 50s ribosomal protein l25 | DQE83_11555 | Not Available | Negative | 2313809 - 2314093 | 10694.0 |
| atp-dependent helicase | DQE83_11560 | Not Available | Negative | 2314218 - 2315978 | 66592.0 |
| 16s rrna pseudouridine(516) synthase | DQE83_11570 | Not Available | Positive | 2316128 - 2316823 | 25866.8 |
| bcr/cfla family drug resistance efflux transporter | DQE83_11575 | Not Available | Positive | 2316851 - 2318041 | 43355.4 |
| hypothetical protein | DQE83_11585 | Not Available | Positive | 2318374 - 2318718 | 12509.9 |
| microcin c abc transporter atp-binding protein yejf | DQE83_11590 | Not Available | Negative | 2318722 - 2320311 | 58665.6 |
| abc transporter permease | DQE83_11595 | Not Available | Negative | 2320313 - 2321338 | 38094.6 |
| abc transporter permease | DQE83_11600 | Not Available | Negative | 2321338 - 2322432 | 40362.6 |
| abc transporter substrate-binding protein | DQE83_11605 | Not Available | Negative | 2322433 - 2324247 | 69753.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





