Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_11400 | Not Available | Negative | 2285333 - 2285524 | 7320.07 |
| porin | DQE83_11405 | Not Available | Positive | 2285814 - 2286905 | 39997.9 |
| fad:protein fmn transferase apbe | DQE83_11410 | Not Available | Positive | 2287017 - 2288072 | 38629.1 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | DQE83_11415 | Not Available | Positive | 2288146 - 2289210 | 39268.9 |
| dna oxidative demethylase alkb | DQE83_11420 | Not Available | Positive | 2289210 - 2289860 | 24027.8 |
| microcin j25 efflux abc transporter yoji | DQE83_11425 | Not Available | Positive | 2289936 - 2291579 | 61572.4 |
| malate:quinone oxidoreductase | DQE83_11430 | Not Available | Positive | 2291797 - 2293443 | 60248.1 |
| ecotin | DQE83_11435 | Not Available | Negative | 2293592 - 2294080 | 18179.1 |
| hypothetical protein | DQE83_11440 | Not Available | Negative | 2294215 - 2294388 | 6530.07 |
| ferredoxin-type protein napf | DQE83_11445 | Not Available | Positive | 2294488 - 2294982 | 18061.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





