Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone osmy | DQE83_11340 | Not Available | Negative | 2271927 - 2272532 | 21079.9 |
| peptide chain release factor 3 | DQE83_11345 | Not Available | Negative | 2272925 - 2274511 | 59391.3 |
| damage-inducible protein dini | DQE83_11350 | Not Available | Positive | 2274730 - 2274978 | 9420.12 |
| toxin | DQE83_11365 | Not Available | Positive | 2275980 - 2276756 | 27933.4 |
| cytolethal distending toxin type v subunit cdtb | DQE83_11370 | Not Available | Positive | 2276753 - 2277562 | 29759.4 |
| toxin | DQE83_11375 | Not Available | Positive | 2277577 - 2278122 | 19956.1 |
| two-component system sensor histidine kinase rcsc | DQE83_11380 | Not Available | Positive | 2278685 - 2281534 | 106512.0 |
| dna-binding response regulator | DQE83_11385 | Not Available | Negative | 2281734 - 2282384 | 23672.0 |
| phosphotransferase rcsd | DQE83_11390 | Not Available | Negative | 2282401 - 2285073 | 100340.0 |
| hypothetical protein | DQE83_11395 | Not Available | Negative | 2285090 - 2285329 | 9226.43 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





