Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activatory protein caif | DQE83_10980 | Not Available | Negative | 2199250 - 2199645 | 15437.1 |
| hypothetical protein | DQE83_10985 | Not Available | Positive | 2199680 - 2199898 | 8212.92 |
| carbamoyl-phosphate synthase large subunit | DQE83_10990 | Not Available | Negative | 2199906 - 2203124 | 117719.0 |
| carbamoyl-phosphate synthase small subunit | DQE83_10995 | Not Available | Negative | 2203142 - 2204290 | 41477.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DQE83_11005 | Not Available | Negative | 2204746 - 2205567 | 28772.4 |
| ribonucleoside hydrolase rihc | DQE83_11010 | Not Available | Negative | 2205734 - 2206654 | 32827.1 |
| nitrite reductase | DQE83_11015 | Not Available | Negative | 2206674 - 2207882 | 45646.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DQE83_11020 | Not Available | Negative | 2207958 - 2208908 | 34776.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DQE83_11025 | Not Available | Negative | 2208910 - 2209359 | 16081.9 |
| lipoprotein signal peptidase | DQE83_11030 | Not Available | Negative | 2209447 - 2209941 | 18129.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





