Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-like protein fixx | DQE83_10930 | Not Available | Negative | 2188082 - 2188369 | 10479.5 |
| fad-dependent oxidoreductase | DQE83_10935 | Not Available | Negative | 2188366 - 2189652 | 45762.7 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DQE83_10940 | Not Available | Negative | 2189703 - 2190644 | 33459.0 |
| electron transfer flavoprotein | DQE83_10945 | Not Available | Negative | 2190659 - 2191429 | 27200.4 |
| l-carnitine/gamma-butyrobetaine antiporter | DQE83_10950 | Not Available | Positive | 2191902 - 2193416 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | DQE83_10955 | Not Available | Positive | 2193447 - 2194589 | 42560.8 |
| l-carnitine coa-transferase | DQE83_10960 | Not Available | Positive | 2194707 - 2195924 | 45103.3 |
| crotonobetaine/carnitine-coa ligase | DQE83_10965 | Not Available | Positive | 2195998 - 2197551 | 58631.5 |
| crotonobetainyl-coa hydratase | DQE83_10970 | Not Available | Positive | 2197660 - 2198445 | 28249.8 |
| carnitine operon protein caie | DQE83_10975 | Not Available | Positive | 2198451 - 2199041 | 21171.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





