Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | DQE83_10825 | Not Available | Positive | 2164354 - 2165856 | 56076.1 |
| l-ribulose-5-phosphate 4-epimerase | DQE83_10830 | Not Available | Positive | 2165971 - 2166666 | 25500.4 |
| dna polymerase ii | DQE83_10835 | Not Available | Positive | 2166741 - 2169092 | 89979.6 |
| rna polymerase-associated protein rapa | DQE83_10840 | Not Available | Positive | 2169256 - 2172162 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | DQE83_10845 | Not Available | Positive | 2172174 - 2172833 | 24862.1 |
| udp pyrophosphate phosphatase | DQE83_10855 | Not Available | Negative | 2173241 - 2174002 | 28507.6 |
| co-chaperone djla | DQE83_10860 | Not Available | Negative | 2174297 - 2175112 | 30625.2 |
| lps assembly protein lptd | DQE83_10865 | Not Available | Positive | 2175367 - 2177721 | 89665.8 |
| chaperone sura | DQE83_10870 | Not Available | Positive | 2177774 - 2179060 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | DQE83_10875 | Not Available | Positive | 2179060 - 2180049 | 35164.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





