Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | DQE83_10770 | Not Available | Positive | 2153448 - 2154053 | 22699.9 |
| glucose uptake inhibitor sgrt | DQE83_10775 | Not Available | Negative | 2154161 - 2154292 | 5382.47 |
| transcriptional regulator sgrr | DQE83_10780 | Not Available | Positive | 2154381 - 2156039 | 64083.7 |
| type iii effector | DQE83_10785 | Not Available | Negative | 2156271 - 2156840 | 21867.9 |
| thiamine abc transporter substrate binding subunit | DQE83_10790 | Not Available | Positive | 2157211 - 2158194 | 36239.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DQE83_10795 | Not Available | Positive | 2158170 - 2159780 | 59419.6 |
| thiamine abc transporter atp-binding protein | DQE83_10800 | Not Available | Positive | 2159764 - 2160462 | 25012.6 |
| deda family protein | DQE83_10805 | Not Available | Negative | 2160576 - 2161340 | 28245.8 |
| arabinose operon regulatory protein | DQE83_10810 | Not Available | Negative | 2161426 - 2162304 | 33385.8 |
| ribulokinase | DQE83_10820 | Not Available | Positive | 2162643 - 2164343 | 61157.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





