Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0231 family protein | DQE83_10520 | Not Available | Negative | 2098372 - 2098734 | 13978.3 |
| aconitate hydratase b | DQE83_10525 | Not Available | Negative | 2098909 - 2101506 | 93489.4 |
| aconitate hydratase | DQE83_10530 | Not Available | Negative | 2101487 - 2101603 | 4750.45 |
| duf3300 domain-containing protein | DQE83_10535 | Not Available | Positive | 2101861 - 2103618 | 65550.2 |
| dihydrolipoyl dehydrogenase | DQE83_10540 | Not Available | Negative | 2103689 - 2105113 | 50691.4 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | DQE83_10545 | Not Available | Negative | 2105321 - 2107213 | 66098.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | DQE83_10550 | Not Available | Negative | 2107228 - 2109891 | 99687.1 |
| hypothetical protein | DQE83_10555 | Not Available | Positive | 2109873 - 2110055 | 6846.28 |
| pyruvate dehydrogenase complex repressor | DQE83_10560 | Not Available | Negative | 2110052 - 2110816 | 29427.2 |
| aromatic amino acid transporter arop | DQE83_10565 | Not Available | Positive | 2111357 - 2112730 | 49693.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





