Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein staf | DQE83_10420 | Not Available | Positive | 2081169 - 2081765 | 21179.1 |
| fimbrial-like adhesin | DQE83_10425 | Not Available | Positive | 2081816 - 2083078 | 45711.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DQE83_10430 | Not Available | Positive | 2083191 - 2083985 | 28151.0 |
| pantoate--beta-alanine ligase | DQE83_10435 | Not Available | Positive | 2083997 - 2084848 | 31610.6 |
| hypothetical protein | DQE83_10440 | Not Available | Negative | 2084944 - 2085153 | 8158.74 |
| isncy family transposase | DQE83_10445 | Not Available | Negative | 2085222 - 2086154 | 35951.3 |
| hypothetical protein | DQE83_10450 | Not Available | Positive | 2086135 - 2086335 | 7645.54 |
| hypothetical protein | DQE83_10455 | Not Available | Negative | 2086275 - 2086478 | 7675.38 |
| aspartate 1-decarboxylase | DQE83_10460 | Not Available | Positive | 2086428 - 2086808 | 13834.5 |
| polysaccharide deacetylase family protein | DQE83_10465 | Not Available | Negative | 2086812 - 2088041 | 46320.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





