Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | DQE83_10210 | Not Available | Negative | 2033269 - 2035701 | 90557.5 |
| zinc metalloprotease rsep | DQE83_10215 | Not Available | Negative | 2035731 - 2037083 | 49074.2 |
| phosphatidate cytidylyltransferase | DQE83_10220 | Not Available | Negative | 2037095 - 2037952 | 31455.6 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | DQE83_10225 | Not Available | Negative | 2037965 - 2038723 | 28314.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DQE83_10230 | Not Available | Negative | 2038912 - 2040108 | 43383.5 |
| ribosome-recycling factor | DQE83_10235 | Not Available | Negative | 2040200 - 2040757 | 20639.7 |
| ump kinase | DQE83_10240 | Not Available | Negative | 2041049 - 2041774 | 25971.9 |
| elongation factor ts | DQE83_10245 | Not Available | Negative | 2041921 - 2042772 | 30424.7 |
| hypothetical protein | DQE83_10250 | Not Available | Positive | 2042791 - 2043078 | 10623.8 |
| 30s ribosomal protein s2 | DQE83_10255 | Not Available | Negative | 2043030 - 2043755 | 26745.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





