Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rcs stress response system protein rcsf | DQE83_10110 | Not Available | Positive | 2013637 - 2014041 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DQE83_10115 | Not Available | Positive | 2014038 - 2014745 | 26411.9 |
| proline--trna ligase | DQE83_10120 | Not Available | Positive | 2014856 - 2016574 | 63626.2 |
| yaef family permuted papain-like enzyme | DQE83_10125 | Not Available | Positive | 2016627 - 2017451 | 29954.9 |
| copper homeostasis/adhesion lipoprotein nlpe | DQE83_10130 | Not Available | Negative | 2017651 - 2018361 | 25864.7 |
| aminoacyl-trna hydrolase | DQE83_10135 | Not Available | Negative | 2018375 - 2018797 | 15618.9 |
| hypothetical protein | DQE83_10140 | Not Available | Negative | 2018794 - 2019339 | 20847.7 |
| hypothetical protein | DQE83_10145 | Not Available | Positive | 2019505 - 2019705 | 7214.59 |
| rho-binding antiterminator | DQE83_10150 | Not Available | Positive | 2019698 - 2019952 | 9422.12 |
| trna(ile)-lysidine synthetase | DQE83_10155 | Not Available | Negative | 2020001 - 2021299 | 48164.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





