Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | DQE83_10060 | Not Available | Positive | 2006230 - 2006925 | 25443.5 |
| thioesterase | DQE83_10065 | Not Available | Negative | 2006977 - 2007375 | 15117.3 |
| hypothetical protein | DQE83_10070 | Not Available | Negative | 2007481 - 2007852 | 12716.4 |
| is110 family transposase | DQE83_10075 | Not Available | Positive | 2008056 - 2009009 | 35041.9 |
| hypothetical protein | DQE83_10080 | Not Available | Positive | 2009138 - 2009356 | 8203.95 |
| replication protein | DQE83_10085 | Not Available | Positive | 2009353 - 2009931 | 21426.0 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | DQE83_10090 | Not Available | Negative | 2010227 - 2010799 | 21125.2 |
| methionine import atp-binding protein metn | DQE83_10095 | Not Available | Positive | 2010987 - 2012018 | 37804.7 |
| methionine abc transporter | DQE83_10100 | Not Available | Positive | 2012011 - 2012664 | 23257.6 |
| methionine abc transporter substrate-binding protein metq | DQE83_10105 | Not Available | Positive | 2012704 - 2013519 | 29419.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





