Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | DQE83_10010 | Not Available | Positive | 1995407 - 1995796 | 14450.4 |
| hypothetical protein | DQE83_10015 | Not Available | Negative | 1995827 - 1996399 | 19442.3 |
| acyl-coa thioesterase ii | DQE83_10020 | Not Available | Positive | 1996617 - 1997477 | 31940.1 |
| ammonia channel | DQE83_10025 | Not Available | Negative | 1997525 - 1998811 | 44503.4 |
| nitrogen regulatory protein p-ii 2 | DQE83_10030 | Not Available | Negative | 1998841 - 1999179 | 12259.9 |
| multidrug abc transporter permease/atp-binding protein | DQE83_10035 | Not Available | Negative | 1999360 - 2001141 | 65167.4 |
| multidrug abc transporter permease/atp-binding protein | DQE83_10040 | Not Available | Negative | 2001134 - 2002906 | 66097.5 |
| transcriptional regulator | DQE83_10045 | Not Available | Negative | 2002936 - 2003394 | 17438.4 |
| hmp-pp phosphatase | DQE83_10050 | Not Available | Negative | 2003547 - 2004365 | 30431.8 |
| sgrr family transcriptional regulator | DQE83_10055 | Not Available | Positive | 2004465 - 2006165 | 64920.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





