Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DQE83_09380 | Not Available | Positive | 1863992 - 1864618 | 22975.5 |
| stress-induced acidophilic repeat motif-containing protein | DQE83_09390 | Not Available | Positive | 1865123 - 1865305 | 6167.86 |
| ferritin-like domain-containing protein | DQE83_09395 | Not Available | Positive | 1865384 - 1865884 | 18473.8 |
| ferritin-like domain-containing protein | DQE83_09400 | Not Available | Positive | 1865921 - 1866427 | 19064.6 |
| manganese catalase family protein | DQE83_09405 | Not Available | Positive | 1866446 - 1867336 | 32179.9 |
| Trna-arg | Not Available | Not Available | Positive | 1875860 - 1875936 | Not Available |
| fimbriae biosynthesis transcriptional regulator fimz | DQE83_09500 | Not Available | Positive | 1876179 - 1876811 | 23662.9 |
| fimbriae assembly protein | DQE83_09505 | Not Available | Negative | 1876814 - 1877329 | 18111.5 |
| type 1 fimbrin d-mannose specific adhesin fimh | DQE83_09510 | Not Available | Negative | 1877340 - 1878347 | 36825.2 |
| fimbrial chaperone sfmc | DQE83_09520 | Not Available | Negative | 1881000 - 1881692 | 25459.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





