Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper transporter | DQE83_09325 | Not Available | Negative | 1852753 - 1852908 | 5756.13 |
| dna-binding response regulator | DQE83_09330 | Not Available | Positive | 1852955 - 1853638 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | DQE83_09335 | Not Available | Positive | 1853628 - 1855070 | 53849.2 |
| bacteriophage n4 adsorption protein b | DQE83_09340 | Not Available | Positive | 1855220 - 1857457 | 85338.3 |
| phage receptor | DQE83_09345 | Not Available | Positive | 1857444 - 1860416 | 111399.0 |
| duf4434 family protein | DQE83_09350 | Not Available | Positive | 1860417 - 1861307 | 33045.6 |
| hypothetical protein | DQE83_09355 | Not Available | Negative | 1861221 - 1861433 | 7559.21 |
| porin thermoregulatory protein envy | DQE83_09360 | Not Available | Positive | 1861490 - 1862251 | 28992.5 |
| hypothetical protein | DQE83_09365 | Not Available | Positive | 1862245 - 1862361 | 4174.89 |
| omptin family outer membrane protease ompt | DQE83_09375 | Not Available | Positive | 1862766 - 1863719 | 35565.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





