Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminated glutathione amidase | DQE83_09020 | Not Available | Negative | 1790857 - 1791645 | 28664.0 |
| fluoride efflux transporter crcb | DQE83_09025 | Not Available | Positive | 1791741 - 1792124 | 13766.1 |
| cold-shock protein cspe | DQE83_09030 | Not Available | Negative | 1792178 - 1792387 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | DQE83_09035 | Not Available | Negative | 1792562 - 1793122 | 21698.5 |
| c4-dicarboxylate abc transporter | DQE83_09040 | Not Available | Positive | 1793607 - 1793726 | 4615.76 |
| anaerobic c4-dicarboxylate transporter dcuc | DQE83_09045 | Not Available | Positive | 1793710 - 1795095 | 48415.3 |
| response regulator | DQE83_09050 | Not Available | Negative | 1795136 - 1795816 | 25454.9 |
| sensor histidine kinase dpib | DQE83_09055 | Not Available | Negative | 1795785 - 1797443 | 61611.6 |
| [citrate (pro-3s)-lyase] ligase | DQE83_09060 | Not Available | Positive | 1797823 - 1798881 | 40049.4 |
| citrate lyase acp | DQE83_09065 | Not Available | Positive | 1798896 - 1799192 | 10689.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





