Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | DQE83_08970 | Not Available | Positive | 1783360 - 1784472 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | DQE83_08975 | Not Available | Positive | 1784483 - 1785571 | 37532.1 |
| d-alanyl-d-alanine carboxypeptidase | DQE83_08980 | Not Available | Positive | 1785711 - 1786922 | 44446.5 |
| duf493 family protein | DQE83_08985 | Not Available | Positive | 1787032 - 1787295 | 9827.92 |
| octanoyltransferase | DQE83_08990 | Not Available | Positive | 1787396 - 1788037 | 23942.0 |
| hypothetical protein | DQE83_08995 | Not Available | Negative | 1788089 - 1788238 | 5685.03 |
| dna-binding transcriptional regulator | DQE83_09000 | Not Available | Positive | 1788297 - 1789250 | 35881.4 |
| dna-binding protein | DQE83_09005 | Not Available | Positive | 1789247 - 1789360 | 4373.26 |
| lipoyl synthase | DQE83_09010 | Not Available | Positive | 1789459 - 1790424 | 36073.8 |
| twin-arginine translocase subunit tata | DQE83_09015 | Not Available | Negative | 1790525 - 1790728 | 7024.71 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





