Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_08920 | Not Available | Positive | 1773125 - 1774102 | 37135.9 |
| zinc ribbon-containing protein | DQE83_08925 | Not Available | Negative | 1774173 - 1774655 | 18798.2 |
| leucine--trna ligase | DQE83_08930 | Not Available | Positive | 1774890 - 1777472 | 97240.0 |
| lps assembly lipoprotein lpte | DQE83_08935 | Not Available | Positive | 1777487 - 1778068 | 21357.8 |
| dna polymerase iii subunit delta | DQE83_08940 | Not Available | Positive | 1778068 - 1779099 | 38702.0 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | DQE83_08945 | Not Available | Positive | 1779101 - 1779742 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | DQE83_08950 | Not Available | Positive | 1779766 - 1780377 | 23309.8 |
| ribosome silencing factor rsfs | DQE83_08955 | Not Available | Positive | 1780637 - 1780954 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DQE83_08960 | Not Available | Positive | 1780958 - 1781425 | 17342.1 |
| penicillin-binding protein 2 | DQE83_08965 | Not Available | Positive | 1781456 - 1783357 | 70874.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





