Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1752171 - 1752247 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1752296 - 1752370 | Not Available |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | DQE83_08830 | Not Available | Negative | 1752524 - 1753699 | 42927.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DQE83_08835 | Not Available | Positive | 1753845 - 1755269 | 53666.0 |
| phoh family protein | DQE83_08840 | Not Available | Positive | 1755383 - 1756462 | 40656.9 |
| endoribonuclease ybey | DQE83_08845 | Not Available | Positive | 1756459 - 1756926 | 17508.6 |
| magnesium and cobalt efflux protein corc | DQE83_08850 | Not Available | Positive | 1757016 - 1757894 | 33300.4 |
| apolipoprotein n-acyltransferase | DQE83_08855 | Not Available | Positive | 1757919 - 1759460 | 57253.3 |
| rhomboid family intramembrane serine protease | DQE83_08860 | Not Available | Negative | 1759593 - 1761470 | 67732.0 |
| amino acid abc transporter substrate-binding protein | DQE83_08865 | Not Available | Positive | 1761926 - 1762834 | 33412.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





