Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DQE83_08670 | Not Available | Negative | 1720796 - 1722685 | 69570.4 |
| fmn-binding protein mioc | DQE83_08675 | Not Available | Negative | 1723064 - 1723507 | 15812.5 |
| asnc family transcriptional regulator | DQE83_08680 | Not Available | Negative | 1723597 - 1724055 | 16888.7 |
| aspartate--ammonia ligase | DQE83_08685 | Not Available | Positive | 1724206 - 1725198 | 36678.7 |
| atpase rava stimulator viaa | DQE83_08690 | Not Available | Negative | 1725203 - 1726654 | 55872.5 |
| atpase rava | DQE83_08695 | Not Available | Negative | 1726648 - 1728144 | 56390.1 |
| low affinity potassium transport system protein kup | DQE83_08700 | Not Available | Positive | 1728367 - 1730235 | 69298.3 |
| d-ribose pyranase | DQE83_08705 | Not Available | Positive | 1730402 - 1730821 | 15342.5 |
| ribose import atp-binding protein rbsa | DQE83_08710 | Not Available | Positive | 1730829 - 1732334 | 55059.1 |
| ribose abc transporter permease | DQE83_08715 | Not Available | Positive | 1732339 - 1733304 | 33454.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





