Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | DQE83_08455 | Not Available | Negative | 1675068 - 1677482 | 89955.0 |
| dna replication/repair protein recf | DQE83_08460 | Not Available | Negative | 1677511 - 1678584 | 40516.4 |
| dna polymerase iii subunit beta | DQE83_08465 | Not Available | Negative | 1678584 - 1679684 | 40589.1 |
| chromosomal replication initiator protein dnaa | DQE83_08470 | Not Available | Negative | 1679689 - 1681092 | 52553.7 |
| hypothetical protein | DQE83_08475 | Not Available | Negative | 1681386 - 1681586 | 7422.87 |
| 50s ribosomal protein l34 | DQE83_08480 | Not Available | Positive | 1681699 - 1681839 | 5380.74 |
| ribonuclease p protein component | DQE83_08485 | Not Available | Positive | 1681856 - 1682215 | 13816.1 |
| membrane protein insertion efficiency factor yidd | DQE83_08490 | Not Available | Positive | 1682179 - 1682436 | 9381.61 |
| membrane protein insertase yidc | DQE83_08495 | Not Available | Positive | 1682439 - 1684085 | 61543.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DQE83_08500 | Not Available | Positive | 1684191 - 1685555 | 49199.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





