Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin tisb | DQE83_08350 | Not Available | Positive | 1655160 - 1655249 | 3195.29 |
| multidrug transporter emrd | DQE83_08355 | Not Available | Positive | 1655529 - 1656713 | 42209.4 |
| radical sam protein | DQE83_08360 | Not Available | Negative | 1656721 - 1657218 | 19115.9 |
| hypothetical protein | DQE83_08365 | Not Available | Negative | 1657215 - 1657577 | 13813.2 |
| hypothetical protein | DQE83_08370 | Not Available | Negative | 1657567 - 1657914 | 12780.1 |
| hypothetical protein | DQE83_08375 | Not Available | Positive | 1658023 - 1658472 | 15664.8 |
| hypothetical protein | DQE83_08380 | Not Available | Negative | 1658519 - 1660012 | 57418.5 |
| solute:sodium symporter family transporter | DQE83_08385 | Not Available | Negative | 1660009 - 1661724 | 62036.7 |
| arac family transcriptional regulator | DQE83_08390 | Not Available | Positive | 1661891 - 1662784 | 33961.8 |
| 6-phospho-alpha-glucosidase | DQE83_08395 | Not Available | Negative | 1662781 - 1664103 | 49332.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





