Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii cell invasion protein sipb | DQE83_08240 | Not Available | Positive | 1623726 - 1625507 | 64208.6 |
| hypothetical protein | DQE83_08245 | Not Available | Positive | 1625520 - 1626671 | 43582.4 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | DQE83_08250 | Not Available | Positive | 1626715 - 1628064 | 50113.7 |
| transcriptional regulator hila | DQE83_08255 | Not Available | Positive | 1628267 - 1629964 | 63982.0 |
| purine ribonucleoside efflux pump nepi | DQE83_08265 | Not Available | Negative | 1638728 - 1639912 | 41659.3 |
| hypothetical protein | DQE83_08270 | Not Available | Positive | 1639911 - 1640102 | 7147.87 |
| duf1198 domain-containing protein | DQE83_08275 | Not Available | Negative | 1640123 - 1640575 | 17220.1 |
| ncs2 family permease | DQE83_08280 | Not Available | Negative | 1640628 - 1641962 | 46984.6 |
| adenine deaminase | DQE83_08285 | Not Available | Positive | 1642137 - 1643903 | 63863.2 |
| hexose-6-phosphate:phosphate antiporter | DQE83_08290 | Not Available | Negative | 1643950 - 1645341 | 50608.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





