Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-xylosidase | DQE83_08190 | Not Available | Negative | 1614403 - 1616721 | 87887.8 |
| inner membrane symporter yicj | DQE83_08195 | Not Available | Negative | 1616731 - 1618113 | 50951.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 1618406 - 1618496 | Not Available |
| cytoplasmic protein | DQE83_08205 | Not Available | Positive | 1618606 - 1618755 | 5594.87 |
| mfs transporter | DQE83_08210 | Not Available | Positive | 1619137 - 1620321 | 43474.1 |
| dmt family transporter | DQE83_08215 | Not Available | Positive | 1620432 - 1621355 | 33030.3 |
| lipoprotein nlpa | DQE83_08220 | Not Available | Negative | 1621359 - 1622177 | 29452.3 |
| hypothetical protein | DQE83_08225 | Not Available | Positive | 1622386 - 1622679 | 11065.4 |
| cesd/sycd/lcrh family type iii secretion system chaperone | DQE83_08230 | Not Available | Positive | 1622981 - 1623478 | 19084.7 |
| hypothetical protein | DQE83_08235 | Not Available | Positive | 1623488 - 1623670 | 6852.79 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





